Pairwise Alignments

Query, 134 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 324 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Variovorax sp. SCN45

 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 49  IIEIAAVCNLTRSHFSRAFKVNTGLSPQAWRLLARMEKAKRLL-ATEAPITHVSLECGFC 107
           +  +AA   L+  HF+R F+   G++P AW    R+  A+RLL A +A    V+ +CGF 
Sbjct: 236 VANLAARMGLSERHFARLFRQEVGVTPAAWVEDVRVTAARRLLEAGDAAPKQVAFQCGFA 295

Query: 108 DQAHFTRAFSRLVGQPPKAWRQ 129
           D     RAF R VG  P  +R+
Sbjct: 296 DADTLRRAFQRHVGITPAEYRK 317