Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 338 a.a., Site-specific tyrosine recombinase XerC from Variovorax sp. SCN45

 Score =  229 bits (585), Expect = 5e-65
 Identities = 141/317 (44%), Positives = 190/317 (59%), Gaps = 27/317 (8%)

Query: 5   LEAYCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQALQIQQLRQLIARLHHHG 64
           +E Y  H+R ER+++  T + Y   L+ +  +  E  ++    +Q   +R+ +A+LH  G
Sbjct: 25  VEKYLEHVRVERRLAARTVELYAFHLKSLTDHAAEAKLS-LDHVQTAHIRRWMAQLHAAG 83

Query: 65  QSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLD--G 122
           + PR +A +LS  R  YR+L  EGL   +P   + APK  + LPK L  D A++L +   
Sbjct: 84  REPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHAPKAGKPLPKALGVDDAVRLAELYD 143

Query: 123 GVDDDFIARRDQAILELFYSSGLRLSELTNLDLDH-------LDLAAGLVQVLGKGGKAR 175
              D +   RD AI+E+ Y  GLR+SELT LD          +DL AG   VLGKG K R
Sbjct: 144 PEADPWTEARDSAIVEMLYGCGLRVSELTGLDAQASSSARGWVDLDAGDANVLGKGSKRR 203

Query: 176 VLPVGRKAREALQAWYRLRG---------IGNPRDRA-VFITRQGNRISPRAVRLRVKVA 225
           ++P+G KA EA++ W  +RG         + +PR  A +FI+ +G R+S +AV    K+ 
Sbjct: 204 IVPMGSKASEAVRDWLAVRGDCAALATSHLRDPRAAAALFISAKGVRMSSQAVW---KLL 260

Query: 226 GERELGQHL----HPHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLA 281
            ER L   L    HPHMLRHSFASHVL+SS DLRAVQE+LGHA ISTTQ+YT LDFQHLA
Sbjct: 261 RERSLKAGLAAPVHPHMLRHSFASHVLQSSSDLRAVQELLGHASISTTQVYTRLDFQHLA 320

Query: 282 AVYDSAHPRAKRSKGTD 298
            VYD+AHPRAK     D
Sbjct: 321 KVYDAAHPRAKAKPEND 337