Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 303 a.a., Site-specific tyrosine recombinase XerD from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 2e-36
 Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 7/282 (2%)

Query: 15  ERQVSEHTSQGYRRDLEKVIAYCEEH--GIADWQALQIQQLRQLIARLHHHGQSPRSLAR 72
           E  +S++T   YRRDL     +  EH  G     A +      + ARL + G++  S  R
Sbjct: 22  EDGLSKNTLAAYRRDLALFAQWLGEHSGGATLGTAKETDLQAYMGARLSNRGKAT-SANR 80

Query: 73  LLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLDGGVDDDFIARR 132
            L+  +  YR+  RE     DP+  L   +   R  K L   +   LL     +  +  R
Sbjct: 81  RLTVFKRYYRWALRERRIAADPSIRLMPARQMPRAIKTLSEKQVDDLLAAPDVESPLGLR 140

Query: 133 DQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWY- 191
           D+A+LEL Y+SGLR+SEL  L    + L  G+++VLGKG K R++P G +AR  ++ +  
Sbjct: 141 DRAMLELMYASGLRVSELVALKAIDMSLNDGVLRVLGKGSKERLVPFGGEARRWIERYLE 200

Query: 192 --RLRGIGNPRDRAVFITRQGNRISPRAVRLRVKV-AGERELGQHLHPHMLRHSFASHVL 248
             R   +   +   +F+T +G  ++     + VK  A    +   L PH LRH+FA+H+L
Sbjct: 201 ESRPAILDGQQTPDLFVTARGAGMTRVMFWIIVKKHATAAGIHVPLSPHTLRHAFATHLL 260

Query: 249 ESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPR 290
               DLRAVQ +LGHADISTT IYTH+  + L  ++   HPR
Sbjct: 261 NHGVDLRAVQLLLGHADISTTTIYTHVARERLKQLHAKHHPR 302