Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 581 a.a., site-specific tyrosine recombinase XerC from Dickeya dianthicola ME23

 Score =  117 bits (294), Expect = 5e-31
 Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 27/297 (9%)

Query: 13  RNERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQALQIQQLRQLIARLHHHGQ------S 66
           R ER  SE T +       + I +  E G+   + + +  L      L+ + +      S
Sbjct: 183 RRERNWSETTLKTQTHHQYRFILWAAERGLHYGRDITLPILEHYQRHLYQYRKPNGEPLS 242

Query: 67  PRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPK----VLDTDRALQLLDG 122
            R+    L  +   + ++ R  L   DPA+GL  P+ E+RLP+    V D ++ L L D 
Sbjct: 243 TRTQRSQLGPLVVWFGWMTRHHLLLADPASGLVLPRLEKRLPRHILSVADVEQVLALPDL 302

Query: 123 GVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVL-GKGGKARVLPVGR 181
                    RD+A++EL +S+G+R  E+  L++  +D +  +V ++ GKG K RV+PVG+
Sbjct: 303 TTLQGI---RDRALMELLWSTGIRRGEVAVLEVYSVDASRHIVTIVQGKGKKDRVIPVGQ 359

Query: 182 KAREALQAWY----RLRGIGNPRDRAVFITRQG-NRISPRAVRLRV----KVAGERELGQ 232
           +A   L A+Y    R + + NP   A+F+   G   ++P  +   V    K +G  + G 
Sbjct: 360 RALRWL-AYYLQAVRPQLLVNPHCPALFVALDGIEGLTPNGITNLVSHYIKASGIAKWGS 418

Query: 233 HLHPHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHP 289
               H+ RH+ A+ +LE+  DLR +Q MLGHA + +TQIYT +  + L AV+ S HP
Sbjct: 419 C---HLFRHAMATQMLENGADLRWIQAMLGHASVESTQIYTQVSIRALQAVHASTHP 472