Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score =  174 bits (442), Expect = 2e-48
 Identities = 116/299 (38%), Positives = 166/299 (55%), Gaps = 20/299 (6%)

Query: 5   LEAYCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQALQIQQLRQLIARLHHHG 64
           +E +   L  ER ++E+T   YR DL  +  +   H  +  QA Q   L+  +A     G
Sbjct: 9   IEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQA-QPSDLQDFLAERLEGG 67

Query: 65  QSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLDGGV 124
               S ARLLSA+R L++YL RE     DP+  LS+PK  +RLPK L   +   LL   V
Sbjct: 68  YKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLAAPV 127

Query: 125 DDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAR 184
            D  I  RD+A+LEL Y++GLR+SEL  L +  + L  G+V+V+GKG K R++P+G +A 
Sbjct: 128 TDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAV 187

Query: 185 EALQAW------YRLRG----IGNPRDRAVFITRQ--GNRISPRAVRLRVKVAGERELGQ 232
             L+ +      + L G    +  P +RA  +TRQ   +RI   A    +          
Sbjct: 188 YWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASID-------SN 240

Query: 233 HLHPHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRA 291
            L PH+LRH+FA+H+L    DLR VQ +LGH+D+STTQIYTH+  + L  ++   HPRA
Sbjct: 241 KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299