Pairwise Alignments
Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440
Subject, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 142 bits (358), Expect = 9e-39
Identities = 93/296 (31%), Positives = 152/296 (51%), Gaps = 12/296 (4%)
Query: 5 LEAYCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEH-GIADWQALQIQQLRQLIARLHHH 63
L ++ +L +E++ S HT Y +DLE+ + E+ AD ++R I L
Sbjct: 2 LFSFINYLEHEKRASAHTVLAYEKDLEQFKEFLEQSFETADLTQAGHGEIRAWIVDLVEQ 61
Query: 64 GQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLL-DG 122
G S ++ R ++ +R Y++L R G DP L A K ++LP+ + QLL D
Sbjct: 62 GLSATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLNDL 121
Query: 123 GVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRK 182
+ F +RD+ ++E Y +G+RLSEL L +D+ V+V GK K R++P+
Sbjct: 122 EYEAGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQGKTVKVYGKRKKQRIIPLTNT 181
Query: 183 AREALQAWYR--LRGIGNPRDRAVFITRQGNR-----ISPRAVRLRVKVAGERELGQHLH 235
E + ++ + N + FI + I R VR + + +
Sbjct: 182 LIENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMIIYRIVRKYLDLFAQTSKRS--- 238
Query: 236 PHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRA 291
PH+LRH+FA+H+L DL AV+++LGHA+++ TQ+YTH + L AV+D AHP+A
Sbjct: 239 PHLLRHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEKLKAVFDQAHPKA 294