Pairwise Alignments

Query, 287 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

Subject, 324 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 69/243 (28%), Positives = 100/243 (41%), Gaps = 37/243 (15%)

Query: 56  DQLLIVEAPNNPEVDFRYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKK-RIRVETKS 114
           D LL+   P   E  F   I N DGS  E+ GNG   FA+ + D+ L +    +RV    
Sbjct: 67  DGLLV--GPFQAEPPFDLMIVNTDGSLAERSGNGLTIFAQALTDQGLLSGACELRVHHDK 124

Query: 115 GIIVLDVQNDGQVSV---------DMGPPRFIPAEI--PFVADAQALNYPLE---VDGQL 160
              V  V    + ++         ++G P F P  +      D   L++  E   ++ Q 
Sbjct: 125 SDAVSPVSTWVEPAIREQVAGFWLELGVPGFGPEVVGAQMEVDETELSHVSELAAINPQW 184

Query: 161 HSIAAVSMGNPHAVLRVDDVQTAPVHE---------------LGPKIENHPRFPQRVNAG 205
            +   V +GNPH V  V+ V   P +                  P        P  VN  
Sbjct: 185 AASQFVRVGNPHCVTLVEQVSALPDNTQMQQPALYEPLKTIAFAPPAGGGRPCPAGVNLQ 244

Query: 206 FIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDS-PVSLDLPGG----RL 260
           +      +R   RV+ERG G T + GT A A A AA   GW++S  V++ +PGG    RL
Sbjct: 245 WAARQPGNRIIARVFERGEGPTASSGTSASAVACAAWRAGWVESGEVAVVMPGGIAPVRL 304

Query: 261 HIE 263
           H +
Sbjct: 305 HTQ 307