Pairwise Alignments

Query, 287 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

Subject, 270 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Sphingobium sp. HT1-2

 Score =  224 bits (571), Expect = 2e-63
 Identities = 125/275 (45%), Positives = 162/275 (58%), Gaps = 13/275 (4%)

Query: 12  MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIV-EAPNNPEVD 70
           M+ RF+KMHGLGNDF+V+D       +    A+   DRH G+G DQL+++ +A    + D
Sbjct: 1   MMSRFSKMHGLGNDFVVIDARQAPVAMTEARARAIADRHAGIGCDQLIVIGDAEAGDQAD 60

Query: 71  FRYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQN-DGQVSV 129
               IFN+DGSEVE CGN  RC   FV        K + + T++G+  LD +  DG  SV
Sbjct: 61  VSMLIFNSDGSEVEACGNATRCVPLFV-------GKDVLIRTRAGL--LDAKGVDGGASV 111

Query: 130 DMGPPRFIPAEIPFVADAQALNYPLEVDGQLHSIAAVSMGNPHAVLRVDDVQTAPVHELG 189
           DMG PRF    IP       L      +  L + AAV++GNPH +  V+D+       LG
Sbjct: 112 DMGAPRFDWDAIPLAYPMDTLTMSASWE-DLPAPAAVNVGNPHVIFFVEDLDAVDFERLG 170

Query: 190 PKIENHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDS 249
           P IE+ P FP RVN  F QV+      L VWERGAG T+ACGTGACA AVAAI +  M  
Sbjct: 171 PLIEHDPLFPARVNVNFAQVVGPQHLRLIVWERGAGLTRACGTGACATAVAAIRRKLMAG 230

Query: 250 PVSLDLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQ 284
           PV++ LPGG L I+WA PG  + MTGPA  V++G+
Sbjct: 231 PVTVSLPGGDLEIDWA-PGSTIRMTGPATHVFDGE 264