Pairwise Alignments

Query, 415 a.a., diaminopimelate decarboxylase from Pseudomonas putida KT2440

Subject, 376 a.a., type III PLP-dependent enzyme from Magnetospirillum magneticum AMB-1

 Score =  123 bits (308), Expect = 1e-32
 Identities = 104/337 (30%), Positives = 162/337 (48%), Gaps = 24/337 (7%)

Query: 55  VCFAVKANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRA 114
           V +AVKAN    ++ +L   G+ FD+ S GE++  LA G  A+R+ F    K + D+  A
Sbjct: 42  VYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLANGAPAERISFGNTIKKQSDIAYA 101

Query: 115 LEVGVHCFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIA 174
              GV  +  +S  ELE+L    AE    + V  R+    D    P         KFG  
Sbjct: 102 YAKGVRLYAFDSEAELEKL----AEAAPGSRVFCRILMTCDGAEWPL------SRKFGCE 151

Query: 175 IADAEAIYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHL 234
           I  A+ + V+A ++  L+  GV  H+GSQ T +  +  A+ +  +L   L   GI LR +
Sbjct: 152 IDMAKDLLVKAREM-GLDPYGVSFHVGSQQTDLRQWDIAVGKAAMLFSALDAAGIELRMV 210

Query: 235 DLGGGVGVRYRDEQP--PRVADYI-KAIRERVGERDLALVFEPGRYIVANAGVLLTRVEY 291
           +LGGG   RYR E     R A+ +  A+ +  G    +++ EPGR +V +AG+L T V  
Sbjct: 211 NLGGGFPARYRKEVDGLERYAEAVMDAMTKHFGNNIPSMIIEPGRSLVGDAGILETEVVL 270

Query: 292 LKHTEHKD---FAIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRA-YDLVGPICETGDF 347
           +    + D   +  +D      +   + +A +    V  R G+  A   L GP C++ D 
Sbjct: 271 ISRKGYDDDVRWVYLDVGKFGGLAETMDEA-IKYRIVTTRDGDDTAPVVLAGPTCDSADI 329

Query: 348 L----GKDRVLNLAEGDLLAVESAGAYGFVMSS-NYN 379
           L    G +  L+L  GD + + S GAY    S+ N+N
Sbjct: 330 LYEKAGYEMPLSLKVGDKVRILSTGAYTTSYSAVNFN 366