Pairwise Alignments

Query, 415 a.a., diaminopimelate decarboxylase from Pseudomonas putida KT2440

Subject, 440 a.a., type III PLP-dependent enzyme from Dickeya dadantii 3937

 Score =  181 bits (458), Expect = 5e-50
 Identities = 128/424 (30%), Positives = 209/424 (49%), Gaps = 32/424 (7%)

Query: 9   GELFAEG----VALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSN 64
           G LFA G    + ++ IA+R GTP YVYS   +  Q +     L  T   + +++KAN N
Sbjct: 13  GSLFANGYVEEIPVANIADRIGTPFYVYSARQLRRQLQQLRQQLP-TGTAIYYSLKANPN 71

Query: 65  LGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNV 124
           L V+  LA  GAG ++ S  EL+  LAAG     +++ G GK+   ++ A++ G+    V
Sbjct: 72  LSVVRALAEQGAGCEVCSPAELKTALAAGVSPQHILYVGPGKSLPALKLAIDCGIRAIVV 131

Query: 125 ESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVR 184
           ES  EL+ L  +AA    V  V+LR+NPD  +     + +G K  +FG+       +   
Sbjct: 132 ESVTELDNLNRLAARANTVQTVALRINPDFSSAHARLVMSG-KPTQFGMMRDTLHTVLAS 190

Query: 185 AAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAEC-GIHLRHLDLGGGVGVR 243
             + P++ + G   ++G+++   +   D    +L L   L +   + L  +D+GGG GV 
Sbjct: 191 LHRWPSISLRGFHVYLGTRILNAQAIADNTRNILQLALDLRDTHRLTLDFVDVGGGFGVP 250

Query: 244 YRDEQPP--------RVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHT 295
           Y  ++ P         +A  +   R R    D  ++ E GRY+VA AG+ +TRV  LK  
Sbjct: 251 YFPKETPLDLPALGAAIASIVADFRRRAA--DTQIIIELGRYLVAEAGLFVTRVNTLKTA 308

Query: 296 EHKDFAIID---------AAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGD 346
             K FA+ D         A +N ++R       +G +  +P     + Y + GP+C   D
Sbjct: 309 GGKTFAVCDGGANCHSAAAGLNSMLRKNFPLLRLGDNQGRPL----QPYQVSGPLCTPTD 364

Query: 347 FLGKDRVL-NLAEGDLLAVESAGAYGFVMS-SNYNTRGRCAEILVDGDQAFEVRRRETVA 404
            LG + +L  L   DL+ +  +GAYG   S  ++ + G   E++VDG +   +R+ ET  
Sbjct: 365 LLGDNVLLPTLEVDDLIGITHSGAYGLTASPGSFLSFGYPVEVMVDGRRLTLIRQPETTE 424

Query: 405 ELYA 408
           +L A
Sbjct: 425 QLLA 428