Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 450 a.a., putative secretion system apparatus ATP synthase SsaN from Xanthobacter sp. DMC5

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 13/215 (6%)

Query: 160 RVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEM 219
           R +D+  PI +GQR  I A    GK+ +L   A +   +     ++V L+ ER  EV E 
Sbjct: 161 RAVDIFTPICEGQRIGIFAGSGVGKSTLLSMFARSAGFDT----VVVALVGERGREVREF 216

Query: 220 QRTV------RGEVVASTFDEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARA 273
                     R  V+ ST D+ P       +  +  A+      + V++++DS+TR A A
Sbjct: 217 LEGPLAASRDRAVVIVSTSDQSPMMRRLAPQAALAVAEYFRNAGESVLLIVDSVTRYAHA 276

Query: 274 YNTVIPSSGK--VLTGGVDAHALEKPKRFFGAARNIEEGGSLTIIATALVETGSKMDEVI 331
              V  ++G+  V  G   +     PK    A   +E  G++T I + LV+ G   ++ +
Sbjct: 277 ARDVALAAGEPAVARGYAPSVFSTLPKLLERAGPGMEGEGAITGIFSVLVD-GDDHNDPV 335

Query: 332 YEEFKGTGNMELPLDRRIAEKRVFPAININRSGTR 366
            +  +GT +  + LDR IA++  FPAIN+  S +R
Sbjct: 336 ADAIRGTLDGHIVLDRAIADQGRFPAINLLGSISR 370