Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 16/243 (6%)

Query: 160 RVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIAANITRNNPECHLIVL-LIDERPEEVTE 218
           R ID    +G+GQR  + A    GKT +L  IA N+     +C +IV  LI ER  E+ E
Sbjct: 160 RSIDGLLTLGEGQRVGLFAGAGCGKTTLLAEIARNV-----DCDVIVFGLIGERGRELRE 214

Query: 219 M-------QRTVRGEVVASTFDEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLA 271
                   Q   +  +V +T D       + A      A+        V++L+DS+TR A
Sbjct: 215 FLDHELDEQLRSKAVLVCATSDRSSMERARAAFTATALAEGYRRKGLRVLLLIDSLTRFA 274

Query: 272 RAYNTVIPSSGKVL-TGGVDAHALEKPKRFFGAARNIEEGGSLTIIATALVETGSKMDEV 330
           RA   +  ++G+ L  GG+         R    A  +   G +T I T L+E  S M++ 
Sbjct: 275 RAQREIGLAAGEPLGRGGLPPSVYSLLPRLVERA-GLTRAGVITAIYTVLIEQDS-MNDP 332

Query: 331 IYEEFKGTGNMELPLDRRIAEKRVFPAININRSGTRREELLTADDELQRMWILRKLLHPM 390
           + +E +   +  + L R++AE+  +PA+++  S +R    +    ++Q    LR+LL   
Sbjct: 333 VADEVRSLLDGHIVLSRKLAERGHYPAVDVLASLSRILSNVAEPADIQAGTALRRLLSAY 392

Query: 391 DEI 393
            +I
Sbjct: 393 QQI 395