Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 418 a.a., Transcription termination factor Rho from Sphingobium sp. HT1-2

 Score =  567 bits (1462), Expect = e-166
 Identities = 272/418 (65%), Positives = 357/418 (85%)

Query: 1   MNLTELKQKPITDLLEMAEQMGIENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD 60
           M+L +LK+    DL+ MAE++G+E  +  RKQD++FA+LK  A++G +I G+G +E+L D
Sbjct: 1   MHLKDLKKTVPADLVTMAEELGVEGASTLRKQDLMFAILKAEAENGAQIMGEGTIEVLPD 60

Query: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120
           GFGFLRS +A++LAGPDDIYVSP+Q+RRF LRTGDT+ G+IR PK+GERYFAL K+ ++N
Sbjct: 61  GFGFLRSPEANFLAGPDDIYVSPNQVRRFGLRTGDTVEGEIRAPKDGERYFALTKLLSVN 120

Query: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180
           FD P+  ++++ F+NLTPL+P ++L+++  + + +D + RVID+ +P GKGQR LIVAPP
Sbjct: 121 FDDPDVVRHRVNFDNLTPLYPEQKLRLDTLDPTIKDKSARVIDIVSPQGKGQRTLIVAPP 180

Query: 181 KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240
           + GKT+MLQNIA  IT N+PE  LIVLLIDERPEEVT+MQR+V+GEVV+STFDEP TRHV
Sbjct: 181 RVGKTVMLQNIAKAITDNHPEVFLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHV 240

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300
           QVAEMVIEKAKRLVEHKKDVVILLDSITRL RAYNTV+PSSGKVLTGGVDA+AL++PKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF 300

Query: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360
           FGAARNIEEGGSL+IIATAL++TGS+MDEVI+EEFKGTGN E+ LDR++A+KR+FPA+++
Sbjct: 301 FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV 360

Query: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSMKR 418
            +SGTR+EELL     L +MW+LR++L  M  + A+EFL+DK+K +KTN++FF +M +
Sbjct: 361 GKSGTRKEELLVEKPTLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMNQ 418