Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 421 a.a., transcription termination factor Rho from Agrobacterium fabrum C58

 Score =  597 bits (1540), Expect = e-175
 Identities = 295/416 (70%), Positives = 362/416 (87%)

Query: 1   MNLTELKQKPITDLLEMAEQMGIENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD 60
           M L ELK K  TDLL  AE + +EN +  RKQ+++FA+LK  A    EI G+GV+E+LQD
Sbjct: 4   MKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKILASQDVEIIGEGVVEVLQD 63

Query: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120
           GFGFLRSA+A+YL GPDDIY+SPSQIRRF+L+TGDT+ G IR PKEGERYFALLKV+TIN
Sbjct: 64  GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVNTIN 123

Query: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180
           FD PE  ++K+ F+NLTPL+PN+R KME    +++DL+ RVIDL AP+GKGQRGLIVAPP
Sbjct: 124 FDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSSRVIDLVAPLGKGQRGLIVAPP 183

Query: 181 KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240
           + GKT++LQNIA +IT N+PEC+LIVLLIDERPEEVT+MQR+V+GEVV+STFDEP  RHV
Sbjct: 184 RTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHV 243

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300
           QVAEMVIEKAKRLVEH +DVVILLDSITRL RAYNTV+PSSGKVLTGGVDA+AL++PKRF
Sbjct: 244 QVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF 303

Query: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360
           FGAARNIEEGGSLTIIATAL++TGS+MDEVI+EEFKGTGN E+ LDR++A+KR+FPA++I
Sbjct: 304 FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDI 363

Query: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSM 416
            +SGTR+E+LL    +LQ++++LR++L PM  + AIEFL+DKLKQTKTN +FF SM
Sbjct: 364 LKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKTNSDFFESM 419