Pairwise Alignments

Query, 370 a.a., putative translation related protein from Pseudomonas putida KT2440

Subject, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  100 bits (249), Expect = 2e-25
 Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 8/351 (2%)

Query: 13  KELTSLRHDSVLLLFLLYAFSVAIYMPAAGSVIGVHNASVAVVDEDHSLLSRKLSEALQP 72
           +E T L  D + L F L    + + + A      V N  +AV+D D S  SR L    + 
Sbjct: 567 REATELMRDRIRLAFALIGPIILLCIAAYSISFDVQNIRLAVLDHDRSAASRDLQLYFEG 626

Query: 73  PEFQPAVP--LPPQRLDQAMDSGQYTFVINVPVNFQSDLLAGRSPELQINVDATAMSQAF 130
             +    P        DQA+       V+++P  F  DL AGR P + + +D  +   A 
Sbjct: 627 SRYFRVEPELASDAAADQALREASTKMVLDIPPGFGRDLTAGRRPAVDVRIDGASPFPAS 686

Query: 131 MGAGYIGRIFERELLDYSQRGNEQS-PVL---INPKALFNPNLEGGWFLAVIQIVNNITI 186
               Y   +  R  +D  +     + P L   I P+ ++N      + +A   ++  + +
Sbjct: 687 NARAYAEAVLLRYAMDQLRSAQPFAVPDLSSTIEPRFIYNQEFRSIYAMAPGVLMLCMIL 746

Query: 187 LAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIGSNALVVVICTWISLVVVVKGAL 246
           +  +LT   ++RE+E G++ +L   P +    ++ K    AL+ +I ++++L++V    L
Sbjct: 747 IPAMLTALGVVREKEIGSITNLYASPASLGAFLVGKQMPYALLAMI-SFVTLILVTVFIL 805

Query: 247 GVPLSGSMGLFLAVTALYLFASTSLGIFLATLARS-TPQFGLLAIPVIIPMLLLSGGSTP 305
           GVPL GS+   L    L++ + T LG+ ++   RS        ++  +IP +  SG   P
Sbjct: 806 GVPLKGSLPALLIGGFLFILSVTGLGLMISAFVRSQVAAIFATSLICLIPSVNFSGLLYP 865

Query: 306 LDSMPQWLQWVMQGSPSTHFVSLSAAILFRDAGWAVVWPDILALTLIGLVF 356
           + ++      +    PS+ F  +S     +  G A      LAL  +  +F
Sbjct: 866 VSTLTGPSHIIGLTFPSSWFQIVSLGTFTKGLGMASFGQAYLALMALAFLF 916