Pairwise Alignments

Query, 370 a.a., putative translation related protein from Pseudomonas putida KT2440

Subject, 916 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  100 bits (248), Expect = 2e-25
 Identities = 87/364 (23%), Positives = 165/364 (45%), Gaps = 10/364 (2%)

Query: 13  KELTSLRHDSVLLLFLLYAFSVAIYMPAAGSVIGVHNASVAVVDEDHSLLSRKLSEALQP 72
           +E   L+ D V     L    + + +   G    ++  + AV+D D+S+LS+  +  +  
Sbjct: 556 RETLELQRDPVRATLALIGSLILMLVIGFGMTTDINELNYAVLDRDNSILSQNYALDISG 615

Query: 73  PEFQPAVPLPPQR----LDQAMDSGQYTFVINVPVNFQSDLLAGRSPELQINVDATAMSQ 128
             +   V   P R    LD+ M  G+   VI +P  F  D+ AGR   +    D     +
Sbjct: 616 SSY--FVEHAPIRDYDDLDRRMKDGELALVIEIPPGFGRDIAAGRQVTVGAWFDGANPQR 673

Query: 129 AFMGAGYIGRIFERELLDYSQ-RGNEQ-SPVLINPKALFNPNLEGGWFLAVIQIVNNITI 186
           A    GYI  + +  L   +  RG+   S   I  +  +NP+++    +  I I   + +
Sbjct: 674 AETVQGYIQGLHQHWLSQQAAARGSAVGSSFSIENRYRYNPDVQSLPAMVPIVIPLLLLM 733

Query: 187 LAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIGSNALVVVICTWISLVVVVKGAL 246
           L  +LT  A++RE+E G++ +L V P++  E +L K     +V+ +  ++ +V++     
Sbjct: 734 LPAMLTALAVVREKEIGSIINLYVTPVSRSEFLLGK-QLPYVVLALVNFLLMVLMAIFIF 792

Query: 247 GVPLSGSMGLFLAVTALYLFASTSLGIFLATLARSTPQFGLLA-IPVIIPMLLLSGGSTP 305
           GVP+ GS    L   A+Y   +T +G+  + + RS      LA I  +IP     G + P
Sbjct: 793 GVPVKGSFPTLLLAAAIYCVTATGMGLLASAVTRSQIAAMFLAMIGTMIPATTYGGMTDP 852

Query: 306 LDSMPQWLQWVMQGSPSTHFVSLSAAILFRDAGWAVVWPDILALTLIGLVFFSVALARFR 365
           + SM    + +    P++H  ++S  +  +  G++ +    L L +   +   +A+   +
Sbjct: 853 VSSMEGSARIIGDIYPASHMFTISRGVFAKALGFSDLAGSFLPLAISAPLIVGIAIMLLK 912

Query: 366 RSLA 369
           +  A
Sbjct: 913 KQEA 916