Pairwise Alignments

Query, 370 a.a., putative translation related protein from Pseudomonas putida KT2440

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 5e-26
 Identities = 94/379 (24%), Positives = 158/379 (41%), Gaps = 20/379 (5%)

Query: 4   LNHTLRLGLKELTSLRHDSVLLLFLLYAFSVAIYMPAAGSVIGVHNASVAVVDEDHSLLS 63
           L   L + ++E   L  D V L F L      + +   G  + V N + AV D+D S  S
Sbjct: 535 LRRLLAVAVREGKELLRDKVRLAFALLGAVFMMVIFGYGISLDVENLAFAVHDQDQSPQS 594

Query: 64  RKLSEALQPPEF--QPAVPLPPQRLDQAMDSGQYTFVINVPVNFQSDLLAGRSPELQINV 121
           R   EA +   +  + A       L Q +   +    + +P  F  DL AGR P +   +
Sbjct: 595 RAYLEAFRGSRYFAEQAPIRDSSELHQRLQRSEIKLALEIPPGFGRDLYAGRQPVVAAWL 654

Query: 122 DATAMSQAFMGAGYIGRIFERELLDYSQRGNE----QSPVLINPKALFNP-----NLEGG 172
           D     +A     Y+  + +  L   ++   +    Q PV +  +  +N      N  G 
Sbjct: 655 DGGMPFRAETSRNYVEAVHQANLEQLAKASPQPQPRQDPVRLETRFRYNQDVVSVNAIGP 714

Query: 173 WFLAVIQIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIGSNALVVVI 232
             +A+I     +  +  +LT   ++RE+E G++ +    PLT LE +L K     L V +
Sbjct: 715 GVMALI-----LAFIPAMLTALGIVREKELGSITNFYATPLTRLEFLLGK-QMPYLAVSL 768

Query: 233 CTWISLVVVVKGALGVPLSGSMGLFLAVTALYLFASTSLGIFLATLARSTPQFGLLAIPV 292
                LV + +    VPL GS+         YL A+TSLG+ ++   R T    +L   +
Sbjct: 769 VNLALLVAMNRWLFAVPLKGSVLALACGGVAYLLATTSLGLLISAFTR-TQIAAILGTMI 827

Query: 293 I--IPMLLLSGGSTPLDSMPQWLQWVMQGSPSTHFVSLSAAILFRDAGWAVVWPDILALT 350
           I  +P +  SG   P  S+      + Q  P+ +F+ ++     +  G   +WP  L L 
Sbjct: 828 ITSLPTIQFSGLIVPRSSLDGAAAVMGQLFPAGYFLDIAVGTFTKALGLRELWPQCLILL 887

Query: 351 LIGLVFFSVALARFRRSLA 369
                F  ++LA  ++  A
Sbjct: 888 SFFAAFTGLSLAMLKKQEA 906