Pairwise Alignments

Query, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

Subject, 505 a.a., ribose ABC transporter ATP-binding protein RbsA from Dickeya dianthicola ME23

 Score =  158 bits (399), Expect = 9e-43
 Identities = 132/496 (26%), Positives = 233/496 (46%), Gaps = 47/496 (9%)

Query: 4   PALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQ 63
           P L  +GI+  +  + AL     ++  G   AL+G +GAGKST++ ++ G+ R   G + 
Sbjct: 3   PLLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIH 62

Query: 64  VLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFG--LGRRECEQRM 121
            LG  +     + +    +  + Q L  NL P+L+I+ENI F    F   LGR + ++  
Sbjct: 63  FLGKDVDFSGPKASQEAGIGIIHQEL--NLIPQLTIAENI-FLGREFTNRLGRIDWKRMY 119

Query: 122 AN---LLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRR 178
           A    LL+  +L++ ++R  G+LS G +Q + +   L  E  ++I+DEPT  +       
Sbjct: 120 AEADKLLKRLNLRYDSRRLVGELSIGDQQMVEIAKVLSFESQVIIMDEPTDALTDTETAS 179

Query: 179 FWELVEQVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAGPSHELAAVTSSGKLD 238
            + +++++++Q   + + ++    E  E  +   +   G+ +   P +EL         +
Sbjct: 180 LFGVIKELQSQGCGI-VYISHRLKEIFEICDDVTVFRDGQFIGERPVNELQ--------E 230

Query: 239 DAFTHYQGAGKAQHQPLAIPPRQATDGPVAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFG 298
           D+        K + Q    P      G V ++  +L+        V  VSF + +GEI G
Sbjct: 231 DSLIEMMVGRKLEEQ---YPRLNQAPGEVRLQVSELS-----GPGVENVSFTLCKGEILG 282

Query: 299 FLGSNGCGKTTTMKVLTGLMPASEGSASLLGRPVDASDLATRKRVGFMSQSFSLYGE--- 355
             G  G G+T  MKVL G +P + G   L     D  D+ TR     ++       E   
Sbjct: 283 VAGLMGAGRTELMKVLYGALPRTHGKVHL-----DGKDVVTRSPQDGLASGIVYISEDRK 337

Query: 356 -------LSTRQNLALHARLF------DLPKAESAQRIDELIERFDLAAIA-DQPSGALP 401
                  +S ++N++L A  +       L   +  Q + + I  F++   +  QP G L 
Sbjct: 338 HDGLVLGMSVKENMSLTALRYFSNAAGSLRHGDEQQAVSDFIRMFNIRTPSMSQPIGLLS 397

Query: 402 LGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSREQGVTIFLSTHFMN 461
            G +Q++++A  ++ RP VLILDEPT GVD  A+ + ++L+ +  +E    I +S+    
Sbjct: 398 GGNQQKVAIARGLMTRPRVLILDEPTRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPE 457

Query: 462 EAQRCDRISLMHAGRV 477
                DRI +MH GR+
Sbjct: 458 VLGMSDRIIVMHEGRL 473



 Score = 81.6 bits (200), Expect = 1e-19
 Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 16/251 (6%)

Query: 269 IEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASLL 328
           ++   +T  F    A++  +  +  G++   +G NG GK+T MKVLTG+     GS   L
Sbjct: 5   LQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIHFL 64

Query: 329 GRPVDASDLATRKR--VGFMSQSFSLYGELSTRQNLALHA----RLFDLPKAESAQRIDE 382
           G+ VD S     +   +G + Q  +L  +L+  +N+ L      RL  +         D+
Sbjct: 65  GKDVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRLGRIDWKRMYAEADK 124

Query: 383 LIERFDLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLL 442
           L++R +L   + +  G L +G +Q + +A  +    +V+I+DEPT  +        + ++
Sbjct: 125 LLKRLNLRYDSRRLVGELSIGDQQMVEIAKVLSFESQVIIMDEPTDALTDTETASLFGVI 184

Query: 443 VELSREQGVTIFLSTHFMNEA-QRCDRISLMHAGRVLACDTP------DALQHQYQGDTL 495
            EL + QG  I   +H + E  + CD +++   G+ +  + P      D+L     G  L
Sbjct: 185 KEL-QSQGCGIVYISHRLKEIFEICDDVTVFRDGQFIG-ERPVNELQEDSLIEMMVGRKL 242

Query: 496 EDAFVRCLEQA 506
           E+ + R L QA
Sbjct: 243 EEQYPR-LNQA 252