Pairwise Alignments

Query, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

Subject, 322 a.a., ABC-type multidrug transport system, ATPase component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  150 bits (378), Expect = 2e-40
 Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 264 DGPVAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEG 323
           D P+ I+   LT  +G F AV  ++  IG+GEIFG LG NG GKTTT+ ++ GL   + G
Sbjct: 2   DNPI-IKLSGLTKNYGAFQAVKGLNLEIGKGEIFGLLGPNGAGKTTTILMMMGLTEPTSG 60

Query: 324 SASLLGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDEL 383
            A + G       +  +++VG+M  S   Y  ++  +NL     L  +P+ E   R    
Sbjct: 61  MAQVCGVNATTHPIMVKQKVGYMPDSVGFYDNMTAMENLMYIGELNGIPRNEIQSRALAT 120

Query: 384 IERFDLAAIA-DQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLL 442
           +E   L   A D+ + A   G++QRL LA  ++  PEV++LDEPT G+DP+   +F  L+
Sbjct: 121 LETVGLTGKAVDKKTRAYSRGMKQRLGLAEVLIKEPEVVVLDEPTLGIDPSGVKEFLSLI 180

Query: 443 VELSREQGVTIFLSTHFMNEAQR-CDRISLMHAGRVLACDTPDALQHQ 489
             LSRE+G+T+ LS+H + + Q+ CDR+ +   G +L   +  AL H+
Sbjct: 181 SSLSRERGLTVLLSSHHLYQVQQVCDRVGIFVKGELLGEGSIHALSHK 228



 Score =  110 bits (275), Expect = 1e-28
 Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 7/231 (3%)

Query: 1   MNAPALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQG 60
           M+ P +   G++  YG   A+  L   +  G    L+GP+GAGK+T + ++ G+     G
Sbjct: 1   MDNPIIKLSGLTKNYGAFQAVKGLNLEIGKGEIFGLLGPNGAGKTTTILMMMGLTEPTSG 60

Query: 61  ELQVLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQR 120
             QV G  +    H   +  KV +MP  +G   Y  ++  EN+ +   L G+ R E + R
Sbjct: 61  MAQVCG--VNATTHPIMVKQKVGYMPDSVG--FYDNMTAMENLMYIGELNGIPRNEIQSR 116

Query: 121 MANLLQATDLQHFA-QRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRF 179
               L+   L   A  +     S GMKQ+LGL   LI EP++++LDEPT G+DP   + F
Sbjct: 117 ALATLETVGLTGKAVDKKTRAYSRGMKQRLGLAEVLIKEPEVVVLDEPTLGIDPSGVKEF 176

Query: 180 WELVEQVRAQRPQLTLLVATAYMEEAEQF-EHCLMLDGGRLLAAGPSHELA 229
             L+  +  +R  LT+L+++ ++ + +Q  +   +   G LL  G  H L+
Sbjct: 177 LSLISSLSRER-GLTVLLSSHHLYQVQQVCDRVGIFVKGELLGEGSIHALS 226