Pairwise Alignments

Query, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

Subject, 911 a.a., ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein from Escherichia coli BL21

 Score =  941 bits (2431), Expect = 0.0
 Identities = 485/903 (53%), Positives = 634/903 (70%), Gaps = 4/903 (0%)

Query: 4   PALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQ 63
           P     G+S  YG  +AL+ +   +P      LIGPDG GKS+LL LI+G + ++QG + 
Sbjct: 11  PVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVM 70

Query: 64  VLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRMAN 123
           VLGG +R  +HR  + P++A+MPQGLG NLY  LS+ EN+ FFA LFG  + E E R+  
Sbjct: 71  VLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINE 130

Query: 124 LLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELV 183
           LL +T L  F  RPAGKLSGGMKQKLGLCCALIH+P+LLILDEPTTGVDPLSR +FW+L+
Sbjct: 131 LLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLI 190

Query: 184 EQVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAGPSHELAAVTSSGKLDDAFTH 243
           + +R ++  +++LVATAYMEEAE+F+  + ++ G +LA G + EL   T S  L++AF +
Sbjct: 191 DSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFIN 250

Query: 244 YQGAGKAQ-HQPLAIPPRQATDGPVAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGS 302
                + Q HQ + IPP Q  +  +AIEA DLT+RFG F AV+ V+F I RGEIFGFLGS
Sbjct: 251 LLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGS 310

Query: 303 NGCGKTTTMKVLTGLMPASEGSASLLGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNL 362
           NGCGK+TTMK+LTGL+PASEG A L G+PVD  D+ TR+RVG+MSQ+FSLY EL+ RQNL
Sbjct: 311 NGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNL 370

Query: 363 ALHARLFDLPKAESAQRIDELIERFDLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLI 422
            LHARLF +P+AE   R+ E+ ERF L  + D    +LPLG+RQRLSLAVAV+HRPE+LI
Sbjct: 371 ELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLI 430

Query: 423 LDEPTSGVDPAARDDFWRLLVELSREQGVTIFLSTHFMNEAQRCDRISLMHAGRVLACDT 482
           LDEPTSGVDP ARD FW+L+V+LSR+  VTIF+STHFMNEA+RCDRISLMHAG+VLA  T
Sbjct: 431 LDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGT 490

Query: 483 PDALQHQYQGDTLEDAFVRCLEQAQELAPAATDSNVLEQASTPTLPLRRGFSLRRLLAVA 542
           P  L  +    +LE+AF+  L   QE A  + ++         T   R+GFSLRRL + +
Sbjct: 491 PQELVEKRGAASLEEAFIAYL---QEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYS 547

Query: 543 VREGKELLRDKVRLAFALLGAVFMMVIFGYGISLDVENLAFAVHDQDQSPQSRAYLEAFR 602
            RE  EL RD VR   AL+G V +M+I GYGIS+DVENL FAV D+DQ+  S+A+     
Sbjct: 548 RREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLS 607

Query: 603 GSRYFAEQAPIRDSSELHQRLQRSEIKLALEIPPGFGRDLYAGRQPVVAAWLDGGMPFRA 662
           GSRYF EQ P+    EL +R++  +I +A+EIPP FGRD+  G    +  W+DG MP RA
Sbjct: 608 GSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRA 667

Query: 663 ETSRNYVEAVHQANLEQLAKASPQPQPRQDPVRLETRFRYNQDVVSVNAIGPGVMALILA 722
           ET + YV+A+HQ+ L+ +A     P  +   + +ETR+RYN DV S+ AI P V+ L+L 
Sbjct: 668 ETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLM 727

Query: 723 FIPAMLTALGIVREKELGSITNFYATPLTRLEFLLGKQMPYLAVSLVNLALLVAMNRWLF 782
            IP+ML+AL +VREKELGSI N Y TP TR EFLLGKQ+PY+A+ ++N  LL  ++ ++F
Sbjct: 728 MIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVF 787

Query: 783 AVPLKGSVLALACGGVAYLLATTSLGLLISAFTRTQIAAILGTMIITSLPTIQFSGLIVP 842
            VP KGS L L    + Y++  T +GLLIS F ++QIAAI GT IIT +P  QFSG+I P
Sbjct: 788 GVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDP 847

Query: 843 RSSLDGAAAVMGQLFPAGYFLDIAVGTFTKALGLRELWPQCLILLSFFAAFTGLSLAMLK 902
            +SL+G    +G+++P  +FL IA GTF+KAL L +LW   + LL       GLS+ +LK
Sbjct: 848 VASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLK 907

Query: 903 KQE 905
           KQE
Sbjct: 908 KQE 910



 Score =  156 bits (394), Expect = 6e-42
 Identities = 92/255 (36%), Positives = 146/255 (57%), Gaps = 9/255 (3%)

Query: 266 PVAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSA 325
           P   +   ++  +G   A+N ++  I    + G +G +G GK++ + +++G     +G+ 
Sbjct: 10  PPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNV 69

Query: 326 SLLGRPVDASDLATRK----RVGFMSQSF--SLYGELSTRQNLALHARLFDLPKAESAQR 379
            +LG   D  D   R+    R+ +M Q    +LY  LS  +N+   ARLF   KAE   R
Sbjct: 70  MVLGG--DMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVR 127

Query: 380 IDELIERFDLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFW 439
           I+EL+    LA   D+P+G L  G++Q+L L  A++H PE+LILDEPT+GVDP +R  FW
Sbjct: 128 INELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFW 187

Query: 440 RLLVEL-SREQGVTIFLSTHFMNEAQRCDRISLMHAGRVLACDTPDALQHQYQGDTLEDA 498
            L+  +  R+  +++ ++T +M EA+R D +  M+AG VLA  + + L+ Q Q  TLE+A
Sbjct: 188 DLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEA 247

Query: 499 FVRCLEQAQELAPAA 513
           F+  L QAQ  A  A
Sbjct: 248 FINLLPQAQRQAHQA 262