Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  588 bits (1517), Expect = e-173
 Identities = 292/365 (80%), Positives = 324/365 (88%), Gaps = 1/365 (0%)

Query: 1   MNKMGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDS 60
           M   GKTLLA +LMGAMA A QA+DKVL+VYNWSDYIAPDTIA FEK++GIKV YDVFDS
Sbjct: 1   MKNAGKTLLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDS 60

Query: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDAS 120
           NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVY+ELD+SKL N+ NL+  LLKAV   S
Sbjct: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVS-VS 119

Query: 121 DKDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPT 180
           D DNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDV+ KPENIAKLKSCGVSFLD+PT
Sbjct: 120 DPDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPT 179

Query: 181 EMLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYS 240
           EMLP ALHYLG PTD+ KK DLK AEDLFLKIRPSI YFHSSKYI D+ANGNICVAVGYS
Sbjct: 180 EMLPVALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYS 239

Query: 241 GDLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIM 300
           GD+EQ+K+RA EAG KVKV Y IPKEGAG+F+DMVAIPKDAE+ DAAY+FMN+L++P++M
Sbjct: 240 GDIEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVM 299

Query: 301 AEITNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTK 360
           AEITN+V FPNGN  AT  VDK+ITSDP IYPPA+V+ +LYAIA   A+ QR +TRSWTK
Sbjct: 300 AEITNSVHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTK 359

Query: 361 IKSGK 365
           IKSGK
Sbjct: 360 IKSGK 364