Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 359 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  409 bits (1050), Expect = e-119
 Identities = 202/359 (56%), Positives = 266/359 (74%), Gaps = 5/359 (1%)

Query: 10  AAALMGAM--ASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDSNETLEAK 67
           A AL+  M  AS  QA + V  +YNWSDYIAPDT   F+K+TGI   YDV+DSNETL+ K
Sbjct: 3   AIALLPLMLVASIGQAAETV-KIYNWSDYIAPDTTKNFQKETGIGFTYDVYDSNETLDGK 61

Query: 68  LLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNKHA 127
           L+ GKSGYD+V PSN+F+A+QI+ G  ++LD+S+LPNWKNL+P LLKA+ + +D  N H 
Sbjct: 62  LMTGKSGYDVVFPSNHFMARQIQGGALKKLDKSQLPNWKNLNPVLLKAL-ENNDPGNAHG 120

Query: 128 FPYMWGSIGIGYNPEKVKAALGVDK-IDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPAA 186
           FPY+WGS GIGYN +KVKA LG +  +DSWD++FKPEN+AKL+ CGV+ LD   E+LPAA
Sbjct: 121 FPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPELLPAA 180

Query: 187 LHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQS 246
           L+YLG P  S K ED K AEDL +K+RP + YFHSSKY  D+ANG+ICVAVG+SGD+ Q+
Sbjct: 181 LNYLGLPHHSKKPEDYKKAEDLLMKVRPYVAYFHSSKYTADLANGDICVAVGFSGDILQA 240

Query: 247 KARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMAEITNA 306
           ++RA EA + V + Y IPKEGA  ++DMVA+P DA ++ A Y FMN+L++P++MA ITN 
Sbjct: 241 ESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADAPNEAAGYAFMNYLLRPQVMASITNY 300

Query: 307 VRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTKIKSGK 365
           V + NGN AA   VD  I +D  IYP  E+  +L+A+ A   ++ RV TR W  I++GK
Sbjct: 301 VHYANGNQAADSLVDPAIKADTKIYPSPEMMGKLFALEAMPLNIDRVRTRVWNTIRTGK 359