Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  397 bits (1019), Expect = e-115
 Identities = 195/360 (54%), Positives = 267/360 (74%), Gaps = 3/360 (0%)

Query: 6   KTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDSNETLE 65
           K L+A A +  +A +VQA   V + YNWSDYI P T+A FEK TGIK   DVFDSNETLE
Sbjct: 8   KALMAGAGL-TLACSVQAAPTV-HFYNWSDYIGPTTLADFEKATGIKPVQDVFDSNETLE 65

Query: 66  AKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNK 125
            KLLAG +GYD+VVPSN+FL KQIKAG +++LD++ LPN+ NLDP L+K + + +D  N+
Sbjct: 66  GKLLAGNTGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPNYSNLDPALMKRL-EKNDPGNQ 124

Query: 126 HAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPA 185
           +A PY+WG+ GIGYN +KVKAALGVD IDSW V+F+PEN+ KL  CGV+FLD+  EMLPA
Sbjct: 125 YAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSADEMLPA 184

Query: 186 ALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQ 245
            L+Y+G   +ST  +D   AE   L +RP +TYFHSSKYI D+ANG+ICVA G+SGD+ Q
Sbjct: 185 VLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQ 244

Query: 246 SKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMAEITN 305
           +KARA EA   V + Y IPKEG   ++D++AIPKDA++   A+ F+N+L++PE++A++++
Sbjct: 245 AKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQVSD 304

Query: 306 AVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTKIKSGK 365
            V + N N  A   +D+ + +D ++YPP EV  +++  +     VQR++TRSWTK+KSGK
Sbjct: 305 YVGYANPNPKAGALMDQAVRTDAAVYPPQEVLDKMFVNSELPPKVQRLMTRSWTKVKSGK 364