Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  305 bits (781), Expect = 1e-87
 Identities = 155/361 (42%), Positives = 227/361 (62%), Gaps = 2/361 (0%)

Query: 4   MGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDSNET 63
           +G  LLA+    A A+ V      L +YNW+DYI   T+A FEK TGIKV YD FD  ET
Sbjct: 8   IGGLLLASGASLAQAAEV-GSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYET 66

Query: 64  LEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKD 123
           ++ KLL G+SGYD+V+ + + +   I AGV++ LD+ +LP+W NLD  ++  +    D  
Sbjct: 67  VQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDL-QGYDPG 125

Query: 124 NKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEML 183
            K++ PY WGS G+ YN +K+ A +    I S  ++F P+ +++   CGV+ +DAPTE++
Sbjct: 126 LKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTEVI 185

Query: 184 PAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDL 243
           P AL YLGK   S    DLKAAE L L IRP I  F S  Y+  + NG++C+A+ +SGD 
Sbjct: 186 PLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGDY 245

Query: 244 EQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMAEI 303
             ++ARA EA   +K+ + IP+EG+  ++D + IPKDA H   A+ F+ FL+QP+ MA++
Sbjct: 246 ATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAKV 305

Query: 304 TNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTKIKS 363
           T+ + + N NAAAT  V  DI  DP+IYP A  +++L+A         R ITR W+ +K+
Sbjct: 306 TDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVKT 365

Query: 364 G 364
           G
Sbjct: 366 G 366