Pairwise Alignments

Query, 380 a.a., spermidine/putrescine ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 361 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Pseudomonas fluorescens GW456-L13

 Score =  270 bits (689), Expect = 6e-77
 Identities = 148/329 (44%), Positives = 210/329 (63%), Gaps = 24/329 (7%)

Query: 23  VKIDRVTKKFDE----TVAVDDVSLEIRKGEIFALLGGSGSGKSTLLRMLAGFERPSEGR 78
           +++  V+K++ +      A+D+VS++I   E F LLG SG GK+TLLR +AGFE  S+G 
Sbjct: 7   IEVRNVSKRYSDDPGLAPALDNVSVDIADNEFFTLLGPSGCGKTTLLRTIAGFEHVSDGE 66

Query: 79  IFLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLQQDKMPKAEIDARVAEMLK 138
           I L G  + D+PP++R +N +FQSYALFPHM+VAQNIAFGL+   + +  I  RV EML 
Sbjct: 67  IRLAGEPVNDLPPFKRRVNTVFQSYALFPHMSVAQNIAFGLEMQGLDRKLIPQRVDEMLA 126

Query: 139 LVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEI 198
           LV M   AKRKP +LSGGQ+QRVALAR+LA +PK+LLLDEP+ ALD KLR +MQ+EL  +
Sbjct: 127 LVQMQHLAKRKPAELSGGQQQRVALARALAPKPKVLLLDEPLSALDLKLRKEMQVELKRV 186

Query: 199 IERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDIYETPTSRLVCEFIGNVNL 258
            +  G+T + VTHDQEEA+T++ RIA+M  G I QIGSP +IYE P  + V +FIG++N 
Sbjct: 187 QKEAGITFIFVTHDQEEALTLSDRIAVMSAGKILQIGSPNEIYERPQHQFVAQFIGDINF 246

Query: 259 FEGDVVDDAEGYAIIASPELERKIYVGHGITTSV-------EDKHITYALRPEKMLVTTQ 311
             G           I   +   K++V +G+   +       +   +  A RPE+  +   
Sbjct: 247 LPGH----------IKRGQQNEKLFVPNGMPVEIPCPAQGFDGSKVQLAFRPERSQLV-- 294

Query: 312 QPTCEHNWSRGKIHDIAYLGGHSVFYVEL 340
           +PT  H+  RG I  + Y+G  +++   L
Sbjct: 295 EPTQPHH-LRGVIEAVLYVGTATLYQCRL 322