Pairwise Alignments

Query, 380 a.a., spermidine/putrescine ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 356 a.a., ABC transporter nucleotide binding/ATPase (putrescine) from Agrobacterium fabrum C58

 Score =  280 bits (716), Expect = 4e-80
 Identities = 157/360 (43%), Positives = 214/360 (59%), Gaps = 8/360 (2%)

Query: 20  QVLVKIDRVTKKFDETVAVDDVSLEIRKGEIFALLGGSGSGKSTLLRMLAGFERPSEGRI 79
           Q +V    V K +  ++AVDD+ LE+  G+   LLG SG GKST LRML GFE PS G I
Sbjct: 2   QPVVHFKNVNKSYGASLAVDDLDLEVAPGQFVTLLGPSGCGKSTTLRMLGGFETPSSGEI 61

Query: 80  FLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLQQDKMPKAEIDARVAEMLKL 139
           +LDG  I+ +PP  R +N++FQ YALFPH++V +NIAFGL+   +  A I  RV E+L L
Sbjct: 62  YLDGQPISHLPPNRRNVNIVFQDYALFPHLSVQRNIAFGLELKGLDSASIHRRVMELLGL 121

Query: 140 VHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEII 199
           V +  +A R P QLSGGQRQRVAL R+LA  P +LLLDEP+ ALD KLR +MQ+EL  I 
Sbjct: 122 VKLQDFAGRMPEQLSGGQRQRVALMRALAPDPNVLLLDEPLSALDAKLRHEMQIELKSIQ 181

Query: 200 ERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDIYETPTSRLVCEFIGNVNLF 259
           +  G T + VTHDQEEA+TM+  + +M+ G I Q+G+P D+Y  P SR V +FIG  N  
Sbjct: 182 QTTGKTFIFVTHDQEEALTMSDVVVVMNKGRIEQMGAPDDLYARPRSRFVADFIGQSNFL 241

Query: 260 EGDVVDDAEGYAIIA-SPELERKIYVGHGITTSVEDKHITYALRPEKMLVTTQQPTCEHN 318
           +G +V    G A +     L R    GH         H+T ALRPE +    +QP+ +  
Sbjct: 242 DGRLVSAESGVATVDWQGSLIRADLNGHHHAIG---SHVTIALRPEALFCLPEQPS-DRF 297

Query: 319 WSRGKIHDIAYLGGHSVFYVELPSGKVVQSFVANAERQGTRPTWGDEVYVWWEDDSGVVL 378
             +G+I    + G H+   + L +G ++    A  +        G+ V++ W D   VVL
Sbjct: 298 ALKGQIERRVFKGAHTTLTIRLDNGALLS---AQLDPVALSHLDGETVWMGWRDRDAVVL 354