Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 305 a.a., Putrescine transport system permease protein PotH from Xanthobacter sp. DMC5

 Score =  304 bits (778), Expect = 2e-87
 Identities = 156/293 (53%), Positives = 205/293 (69%), Gaps = 6/293 (2%)

Query: 17  GRHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLV-----LN 71
           GR +VI VP++WL   F+ PF IV KIS ++  VA PPY            +      L+
Sbjct: 10  GRWVVIAVPYLWLLALFLAPFLIVFKISLSQDVVAQPPYAPQLDLSNGLAGITEFLSGLS 69

Query: 72  LANYGLLTE-DELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMM 130
            ANYG + +    +L AY  SL +A  STLL LL+G+P+AY +A A +  Q  LL+L+++
Sbjct: 70  FANYGYVLDFSNEFLEAYGSSLVIASISTLLLLLVGYPIAYGMARAPRSIQPTLLMLVIL 129

Query: 131 PTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMIL 190
           P WT+ LIRVYAW+GILS  GLLN  L+  G+ID PL+ILNTNLAVYIG+VYSYLPFM+L
Sbjct: 130 PFWTSFLIRVYAWIGILSPEGLLNQGLMALGVIDTPLEILNTNLAVYIGIVYSYLPFMVL 189

Query: 191 PLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPEL 250
           PL++ L K D +LLEAA+DLG     +FWKIT PLS  G+ AG +L FIP VGEFVIP+L
Sbjct: 190 PLYSALEKLDLTLLEAAADLGCPPVKAFWKITFPLSIPGVAAGALLCFIPAVGEFVIPDL 249

Query: 251 LGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRSQAKEME 303
           LGG +TLMIGK LW EF  NR W V+SA+AV++L +L++PI+++   Q +E+E
Sbjct: 250 LGGSDTLMIGKSLWTEFTVNRSWTVSSAVAVLLLLVLVIPIVIYQNIQQRELE 302