Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 291 a.a., Spermidine/putrescine transport system permease protein PotB from Xanthobacter sp. DMC5

 Score =  135 bits (341), Expect = 9e-37
 Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 13/265 (4%)

Query: 33  FMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLTEDELYLSAYLGSL 92
           F+ P   +LK+SF EA  +              +    NL  +     D   L     S+
Sbjct: 35  FLWPVVNLLKMSFREAQAS------------GALGAGYNLDTWTNALTDSFTLELITNSV 82

Query: 93  KMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGILSNNGL 152
            ++   T+L L+  +P+A  +  +    +T+L++L++ P  T+ ++R Y W+ ILS+ GL
Sbjct: 83  GVSLLITVLTLIASYPIALYLHRSTGTWRTMLMVLVVAPLLTSAVVRTYGWIAILSDRGL 142

Query: 153 LNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAASDLGS 212
           +   L+  G+ + P  + N    V IG+    +P+MIL L +   + DP L EAA  LG+
Sbjct: 143 VANALMALGMAEPPRLMFNLT-GVVIGLTEILMPYMILALLSGFGRLDPRLEEAALTLGA 201

Query: 213 STFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNNRD 272
           S   +FW++ +PL+  G+  G +L F+  +  FV P+LLGG    ++   ++ +     +
Sbjct: 202 SPLKTFWRVVLPLTAPGMALGGLLCFVLAISSFVTPKLLGGGRVFLLATEIYDQAIVTLN 261

Query: 273 WPVASALAVVMLAILIVPILLFNRS 297
           WP+A+AL++++L +  + + L+ R+
Sbjct: 262 WPLAAALSMIVLVVFGISLALYARA 286