Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 306 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  548 bits (1411), Expect = e-161
 Identities = 269/305 (88%), Positives = 291/305 (95%)

Query: 1   MKLRKLKRAFQRLVPEGRHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYT 60
           M ++KLKR  QR+ P GRH VIG+PF+WLFLFFMLPFFIVLKISFAEADVAIPPYTEIYT
Sbjct: 1   MNMKKLKRRLQRITPSGRHAVIGIPFLWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYT 60

Query: 61  YVEDKIQLVLNLANYGLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKET 120
           +VE K+QLVLNL NY +L +DELY++AYLGSLKMAFFSTLLCLLIG+PMAYAIA+A+KE 
Sbjct: 61  FVEQKLQLVLNLGNYAMLGDDELYIAAYLGSLKMAFFSTLLCLLIGYPMAYAIASARKEM 120

Query: 121 QTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGV 180
           QTVL+LLIMMPTWTAILIRVYAWMGILSNNGLLNGFL+  GLI++PLQILNTN+AVYIGV
Sbjct: 121 QTVLVLLIMMPTWTAILIRVYAWMGILSNNGLLNGFLMSMGLINEPLQILNTNIAVYIGV 180

Query: 181 VYSYLPFMILPLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIP 240
           VYSYLPFMILPL+ANLVKHD SLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIP
Sbjct: 181 VYSYLPFMILPLYANLVKHDQSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIP 240

Query: 241 VVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRSQAK 300
           VVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPI+LFNRSQAK
Sbjct: 241 VVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPIILFNRSQAK 300

Query: 301 EMEGR 305
           EMEG+
Sbjct: 301 EMEGK 305