Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 415 a.a., polyamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  167 bits (424), Expect = 3e-46
 Identities = 81/219 (36%), Positives = 134/219 (61%), Gaps = 4/219 (1%)

Query: 80  EDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIR 139
           +  +YL  +  +  M    T +CLL+ +P+AY +AN       +L++L+++P WT+IL+R
Sbjct: 189 DQAIYLDIFARTFWMGLVITAVCLLLAYPLAYLLANLPARQSNLLMILVLLPFWTSILVR 248

Query: 140 VYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKH 199
           V AW+ +L + GL+N  L+  GLID+PL+++     VYI +V+  LPFMILP+++ +   
Sbjct: 249 VAAWIVLLQSGGLINSALMGMGLIDKPLELVFNRTGVYISMVHILLPFMILPIYSVMKGI 308

Query: 200 DPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMI 259
            P+ + AA  LG   F SFW++  P +  G+ AGC+LVFI  +G ++ P LLG P   M+
Sbjct: 309 SPTYMRAAISLGCHPFTSFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALLGSPNDQMV 368

Query: 260 GKVLWQEFFNNR--DWPVASALAVVMLAILIVPILLFNR 296
               +  F+ N   +W +A+AL  ++L   +V  L++NR
Sbjct: 369 S--YFVAFYTNTSINWGMATALGGLLLLATVVLYLIYNR 405