Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 283 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score =  157 bits (398), Expect = 2e-43
 Identities = 80/262 (30%), Positives = 146/262 (55%), Gaps = 2/262 (0%)

Query: 36  PFFIVLKISFAEADVAIPPYTEIYTYVEDK-IQLVLNLANYGLLTEDELYLSAYLGSLKM 94
           P  ++L ++F    + + P + ++ Y     I     LANY  +  DE Y    + +L +
Sbjct: 14  PLLLLLLLAFVAPVLLMVPLS-LHPYEPGTGISAGWTLANYTSIVTDEYYREVVVRTLVL 72

Query: 95  AFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLN 154
            F  T +CLL+G+P+AY IANA    +  L +L++ P    +++R + W+ +L+N GL+N
Sbjct: 73  GFGVTAICLLLGYPLAYYIANAGPRMRLALTMLVIFPMLLNLVVRSFGWIALLANRGLVN 132

Query: 155 GFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAASDLGSST 214
             L+  GLI++P++++     + +G+ + +LPFM+L L   +      +  AA  L +S 
Sbjct: 133 NLLIDIGLIERPIKMMFNLFGLLVGMSHIFLPFMVLMLVPAIQAISKDVQAAAYTLAASR 192

Query: 215 FNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWP 274
              FW IT+P+S  GI++G +LVF+  +   V P +LGGP   ++  +++ +F    DWP
Sbjct: 193 LRVFWSITLPMSAPGILSGSILVFVLTISALVTPRMLGGPTYKVMATLIYDDFLQTLDWP 252

Query: 275 VASALAVVMLAILIVPILLFNR 296
             +A++  + A+ +  I L +R
Sbjct: 253 AGAAMSFALTALTLAVIGLSSR 274