Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 285 a.a., Spermidine/putrescine transport system permease protein PotB from Azospirillum sp. SherDot2

 Score =  153 bits (386), Expect = 5e-42
 Identities = 81/265 (30%), Positives = 145/265 (54%), Gaps = 16/265 (6%)

Query: 31  LFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLTEDELYLSAYLG 90
           LFF+ P  I+L +SF + D     Y                L  Y     D   L     
Sbjct: 25  LFFVTPLVILLALSF-QTDPQGGHY---------------GLTQYVAFLGDSFSLGVLGS 68

Query: 91  SLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGILSNN 150
           +L +    T+L LL+G+P+A+    +    + +++LL+++P  T++++R +AW+ IL   
Sbjct: 69  TLWLGVKVTVLTLLLGYPVAWLHQRSPGWARGIIMLLVLLPLLTSVVVRTFAWVVILGRQ 128

Query: 151 GLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAASDL 210
           G++N  L W GLID PL++L T   V + +    +P M+LP+   L + DP+  +A+S L
Sbjct: 129 GIVNATLSWIGLIDTPLKLLYTEGGVVVALAQVQMPLMVLPIITALSRIDPNFADASSVL 188

Query: 211 GSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNN 270
           G+  + +F K+ +PLS  GI+AGC+L +   +  F+   L+GG + L +   ++Q+    
Sbjct: 189 GAGHWRTFRKVILPLSLPGIVAGCLLTYAAAITAFITQSLIGGGQMLFMPMYIYQQASTL 248

Query: 271 RDWPVASALAVVMLAILIVPILLFN 295
           ++WP A+A+++V L  ++V + +FN
Sbjct: 249 QNWPFAAAISIVFLLSVLVVVSIFN 273