Pairwise Alignments

Query, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 270 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  274 bits (701), Expect = 1e-78
 Identities = 148/280 (52%), Positives = 194/280 (69%), Gaps = 12/280 (4%)

Query: 1   MKRFSFSKLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSIKWYVGLLDNSQLMGSV 60
           MKR  F   +L LG  F+Y+P++IL+IYSFNASKLVTVWGG+S++WY  +  N  LM + 
Sbjct: 1   MKRGKFDITVLTLGFAFLYIPIIILIIYSFNASKLVTVWGGFSLQWYKSMWSNQGLMDAA 60

Query: 61  MRSLEIACYTAVAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLF 120
             +L +   +A     LGTLAA  LTR  RF GR LF G++ APLVMPEVITGLSLLLLF
Sbjct: 61  WVTLRVGILSATIGTILGTLAALSLTRFARFPGRVLFSGMIYAPLVMPEVITGLSLLLLF 120

Query: 121 VAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVF 180
           VA+        +RG  T+ IAHTTF   YVA+VV +RL   D S+EEAA+DLG  P K F
Sbjct: 121 VAVG------VDRGFWTVVIAHTTFTMCYVAIVVQSRLLTFDRSLEEAALDLGCPPVKTF 174

Query: 181 FLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAV 240
           F IT+P+I P++ AG M++F LSLDDLV+ASF +GPG+TTLP++++S VRLGV PEINA+
Sbjct: 175 FRITLPLIFPAVIAGWMLAFTLSLDDLVIASFATGPGATTLPIKIYSQVRLGVTPEINAI 234

Query: 241 ASLILLSVSLVTFFVWYFSRQAEERRRKAIQQAIEEGAAA 280
            +++   + LVT  V   S  +   +R  +Q+  +E AAA
Sbjct: 235 CTIL---IGLVTIGVIAASVAS---KRTELQRMRDEHAAA 268