Pairwise Alignments

Query, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 371 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  151 bits (382), Expect = 2e-41
 Identities = 126/361 (34%), Positives = 174/361 (48%), Gaps = 17/361 (4%)

Query: 1   MALMRPLS--VVCLGLLYMLTGCSKEEV--PET-LPRVGVQQVQPTDFAARVTLTGDVQA 55
           MA  R LS  V+C  L + L  C ++    P T  P V    VQ     +R + TG V A
Sbjct: 1   MARRRLLSFAVIC-ALPFALAACGEKTPSDPRTQAPLVRAATVQGAGVESR-SFTGTVAA 58

Query: 56  RVQTDLSFRVGGKIISRSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQT 115
           RV++DL FRV GK++ R VD G  VK  Q L RLDP DL+    + +  V AA+AR  QT
Sbjct: 59  RVESDLGFRVSGKVLERLVDAGQTVKRGQPLMRLDPVDLELAARTQQETVAAARARALQT 118

Query: 116 SAAFVRQQKLLPKGYTSQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAG 175
           +    R + L   G  S S YD  +AA  + ++ L AAQAQ   A     Y  LV++  G
Sbjct: 119 TEDEARYRGLRGTGAISSSAYDQVKAAADAAKAQLSAAQAQADVARNASRYAVLVADGDG 178

Query: 176 VITERQAEVGQVVQATMPIFSLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQA 235
           ++ E  AE GQVV A   +  LA  G R+AV  + E+L   P   +  + +      V  
Sbjct: 179 IVMETLAEPGQVVNAGQTVVRLAQAGQREAVIQLPETL--RPALGSTGLATRFGKEGVSI 236

Query: 236 HGFVREITPTVSAQSGTVQVKVGLKDVPPGMQLGAPVT-----ATTNAQGRPSIELPWSA 290
              +R+++ T    + T + +  L+       LGA VT     A    QGR  +++P  +
Sbjct: 237 PATLRQLSNTADRLTRTFEARYVLEGELAATPLGATVTIQIPDAQAATQGR--LQVPLGS 294

Query: 291 LTKALHEPAVWVV-GEGDKVELRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQ 349
           L  A   P VWV+ GE  KV  R V I+        V   ++ GE +V  G  LL  G Q
Sbjct: 295 LFDAGKGPGVWVIHGEPAKVAWRPVAIQHMGDDAARVTGQIQQGERIVALGAHLLREGEQ 354

Query: 350 V 350
           V
Sbjct: 355 V 355