Pairwise Alignments

Query, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  108 bits (270), Expect = 2e-28
 Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 21/360 (5%)

Query: 17  MLTGCSKEEVPETL-----PRVGVQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKIIS 71
           +LTGC  +           P VG+  ++         L G   A    ++  +V G I+ 
Sbjct: 21  VLTGCDNKASQGGAQQGGAPEVGIITIKSQTLNIITELPGRTSAYRIAEVRPQVNGIILK 80

Query: 72  RSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGYT 131
           R+   G  VKA   L ++DP   Q   ++AKA +  AQA          R + LL   Y 
Sbjct: 81  RNFVEGSDVKAGTSLYQIDPATYQAQYNNAKAALVQAQANAEIAQLTVNRYKPLLGTNYV 140

Query: 132 SQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAG-----------VITER 180
           S+ +YD A A  R  ++A+ AA+A L NA   L+YT + +   G           +++  
Sbjct: 141 SKQDYDQAVATARQTEAAVAAAKASLDNAQISLNYTRVTAPITGRVGKSTVTEGALVSNA 200

Query: 181 QAEVGQVVQATMPIFSLAVDGDRDAV---FNVYESLLVAPPSDAGVVVSLLDDPKVQAHG 237
           QA     +Q   PI+        D +     +    L      A V ++L    +    G
Sbjct: 201 QATAMTTIQQLDPIYVDVTQSTNDFLRLKKELESGTLQQTNGKANVQLTLDSGTRYSQAG 260

Query: 238 FVREITPTVSAQSGTVQVKVGLKDVPPGMQLGAPVTATTNAQGRP-SIELPWSALTKALH 296
            +     TV   +G++ ++    +    +  G  V A  ++   P +I +P   +++   
Sbjct: 261 TLEFSDVTVDETTGSITLRAVFPNPDHNLLPGMFVRAQLDSGVTPNAILVPQQGVSRTPR 320

Query: 297 -EPAVWVVGEGDKVELRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQVLKVDA 355
            +  V +VGEGDKVE+  +   + +  K +V SG+K G+ +++ G Q + PGMQV   +A
Sbjct: 321 GDATVMLVGEGDKVEVHSITTGQAIGDKWLVTSGVKSGDRIILTGLQKIRPGMQVKAQEA 380



 Score = 30.4 bits (67), Expect = 9e-05
 Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 13/175 (7%)

Query: 112 VTQTSAAFVRQQKLLPKGYTSQSEYDA-AEAALRSNQSALKAAQAQLANANEQLSYTALV 170
           VTQ++  F+R +K L  G   Q+   A  +  L S     +A   + ++     +  ++ 
Sbjct: 218 VTQSTNDFLRLKKELESGTLQQTNGKANVQLTLDSGTRYSQAGTLEFSDVTVDETTGSIT 277

Query: 171 SEAAGVITERQAEVGQVVQATMPIFSLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDD 230
             A     +     G  V+A      L      +A+    + +   P  DA V++ + + 
Sbjct: 278 LRAVFPNPDHNLLPGMFVRA-----QLDSGVTPNAILVPQQGVSRTPRGDATVML-VGEG 331

Query: 231 PKVQAHGFVR------EITPTVSAQSGTVQVKVGLKDVPPGMQLGAPVTATTNAQ 279
            KV+ H          +   T   +SG   +  GL+ + PGMQ+ A   A  NAQ
Sbjct: 332 DKVEVHSITTGQAIGDKWLVTSGVKSGDRIILTGLQKIRPGMQVKAQEAAAGNAQ 386