Pairwise Alignments

Query, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 361 a.a., efflux protein from Agrobacterium fabrum C58

 Score =  171 bits (434), Expect = 2e-47
 Identities = 118/341 (34%), Positives = 176/341 (51%), Gaps = 5/341 (1%)

Query: 18  LTGCS-KEEVPETLPRVGVQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKIISRSVDV 76
           L+ C  K+E     PR  +  V     A  + LTG V++R++TDL FRV G+II+R+VDV
Sbjct: 17  LSSCQEKQEAAAEAPRPVLSVVVEEKLADALRLTGTVESRIKTDLGFRVLGRIIARNVDV 76

Query: 77  GDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGYTSQSEY 136
            D VK   V+A +DP  L+ +V SA++++  A+A++        RQ+ L      +++  
Sbjct: 77  ADLVKKGDVVASIDPLALELSVKSAQSDLSNAEAQLANAVTTEQRQRVLAEARSGTEAAL 136

Query: 137 DAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQAEVGQVVQATMPIFS 196
           + AE A+R+  +A+  A+A L  A EQL Y  L +E  GV+T    E+GQVV A   + +
Sbjct: 137 EEAEQAMRTANAAVAKARANLDKAEEQLGYAQLRAEFDGVVTATSGEIGQVVSAGQTVVT 196

Query: 197 LAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQAHGFVREITPTVSAQSGTVQVK 256
           +A    RD V +V +         +   ++L  DPK+   G VREI P     + T + K
Sbjct: 197 IARPEVRDVVVDVPQFAAQRLEIGSTFEIALQLDPKIHMTGVVREIAPEAETATRTRRTK 256

Query: 257 VGLKDVPPGMQLGAPVTATTNAQGRPSIELPWSALTKALHEPAVWVV-GEGDKVELRKVE 315
           + L+D P   +LG+ VTA   A   P I LP SAL K      VW+V  +   V  R V 
Sbjct: 257 ISLQDAPQAFRLGSVVTALALAASEPQITLPASALLKTDSGWGVWIVNADTATVTYRPVT 316

Query: 316 I--RRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQVLKVD 354
           I       G + +  G+K GE V   G   L  G Q +++D
Sbjct: 317 IDGEPAEGGSVRITGGIKPGERVASAGVHKLKDG-QAIRID 356