Pairwise Alignments

Query, 355 a.a., Efflux membrane fusion protein, RND family from Pseudomonas putida KT2440

Subject, 377 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

 Score =  225 bits (573), Expect = 2e-63
 Identities = 129/349 (36%), Positives = 191/349 (54%), Gaps = 2/349 (0%)

Query: 2   KRLLLMLSAAVLLVGCTSEEEAPEVI--RPVLSVKVEPQVQSQLGRFAGSIQARFESTLG 59
           K +LL +  A   +    E + P+    RPV +V    +  S      G ++A+ E+T G
Sbjct: 18  KHMLLGVLGACFFLSACGEAQKPQAQEPRPVRTVVATNRAASDAVSLTGVVEAQNEATYG 77

Query: 60  FRVSGRIARRWLDVGAQVKPGDTLATLDPTDQQNQLRAAEGDLAKVQAQWINAQADARRQ 119
           FR+SGR+  R ++VG +V PG  LA LDP D+QN LR+A+  L    A     +    RQ
Sbjct: 78  FRISGRVIDRLVNVGDRVAPGQVLARLDPQDEQNALRSAQAALGAANANLTQTRNQYERQ 137

Query: 120 QQLYDRGVGAQAQLDIAQTNLKTTSAALEQARSAVSQARDQLDYSTLRADHAAVITAWQA 179
           +QL  RG   +AQ + A+       A ++ A + +  A D+L ++ L+AD A V+T  +A
Sbjct: 138 RQLLARGFTPRAQYEQAEQAFLNARAQVDDAEARLQMAEDRLGFTELKADSAGVVTQRRA 197

Query: 180 EAGQTVTAGQAVVTLARPDVKEAVIDLPIGLAEQLSKGLTFTVASQLDPTINTTASLREL 239
           E G+ V AGQ V+ +AR D ++AV D+P  +   L      TVA   DP +  T  +RE+
Sbjct: 198 EPGEVVQAGQPVIEVARQDGRDAVFDVPAAMLSGLPGDPEVTVALATDPAVTATGRVREV 257

Query: 240 EPQADATTRTRRARLTLASTPAAFHLGTAISVTLSSEVSPRSELPLSALLERDGKTQVWV 299
            PQAD  TRT R R+ L + P    LGT +   +  +  P  E+P SAL   + K  VWV
Sbjct: 258 APQADPVTRTFRVRVGLTNPPEGLRLGTTVVGRVMVDRGPVVEIPASALTRLNDKPAVWV 317

Query: 300 IDTQNKTVATRDVALIDRTADSIVLSAGVQPGERVVTAGVNSLKPGQKV 348
           +D + +TVA R + ++     S+ +  G++P E VVTAGV +L PGQKV
Sbjct: 318 VDPKTQTVALRTIEVLRFGPASVSVGEGLKPSEIVVTAGVQALHPGQKV 366