Pairwise Alignments

Query, 276 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 470 a.a., Transcriptional regulatory protein ZraR from Xanthobacter sp. DMC5

 Score =  200 bits (509), Expect = 4e-56
 Identities = 113/234 (48%), Positives = 149/234 (63%), Gaps = 2/234 (0%)

Query: 36  SQQLREDLERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGL-FVSVNCAAISPTYAD 94
           ++ +R  +ER+ P P  VLI GE+GTGKE+ AR +H  S R    FV VNCAAI+P   +
Sbjct: 182 TRAVRAMIERVGPMPSTVLITGESGTGKEVTARALHAVSARAAKPFVPVNCAAIAPEIIE 241

Query: 95  AELFGYSAGSHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGA 154
           +ELFG+  G+  G ASSR G F  A GGTL+LDE+ +LP A+Q KLL  +E+R+V  VGA
Sbjct: 242 SELFGHLKGAFTGAASSREGLFFYAQGGTLFLDEVGELPPAMQSKLLRVIEDRKVRPVGA 301

Query: 155 QQPQPVDVRLVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFA 214
           ++  PVDVRLVAAT+ +L   V AGRF + LY  L    + L PLRERP D+ PLA  F 
Sbjct: 302 EREIPVDVRLVAATNANLTAQVAAGRFRQDLYYRLNVVNIHLAPLRERPEDVAPLAHMFI 361

Query: 215 GIYSVRLQRPVPLVSEAAQRVLEGHFWPGNTRELENVIHFALLVND-GEEILPE 267
              S RL  P   ++E     L  + WPGN REL NVI  +L++ D   +++PE
Sbjct: 362 AELSARLGVPPLDLTEPVLTFLTRYPWPGNVRELRNVIERSLILGDFPRDVVPE 415