Pairwise Alignments

Query, 276 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  197 bits (502), Expect = 3e-55
 Identities = 112/243 (46%), Positives = 150/243 (61%), Gaps = 1/243 (0%)

Query: 30  VFIDPRSQQLREDLERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGL-FVSVNCAAI 88
           +  +P S QL E   R+A     VLI GE+GTGKE+LAR IH+ S R    F+++NCAAI
Sbjct: 131 IAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSTRAKQPFIAINCAAI 190

Query: 89  SPTYADAELFGYSAGSHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENRE 148
                +A LFG+  GS  G  +++AG F  A GGT+ LDEI+++PL +Q KLL  L+ RE
Sbjct: 191 PDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQERE 250

Query: 149 VTRVGAQQPQPVDVRLVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILP 208
           V RVGA++P  +D+R+VA T+ DLA  V AGRF E L+  L    L   PLRERP DI+P
Sbjct: 251 VERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRPLRERPADIIP 310

Query: 209 LAEYFAGIYSVRLQRPVPLVSEAAQRVLEGHFWPGNTRELENVIHFALLVNDGEEILPED 268
           LAE     +  +++     +S  AQ  L  + WPGN REL+N I  AL++  G  I P+D
Sbjct: 311 LAERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQRALILQQGGLIQPQD 370

Query: 269 LDL 271
             L
Sbjct: 371 FCL 373