Pairwise Alignments

Query, 276 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  192 bits (488), Expect = 1e-53
 Identities = 107/242 (44%), Positives = 149/242 (61%), Gaps = 5/242 (2%)

Query: 37  QQLREDLERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGL-FVSVNCAAISPTYADA 95
           Q +   + ++AP    VLI+GE+GTGKEL+AR +H  S R     +SVNCAAI  T  ++
Sbjct: 160 QDMYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIES 219

Query: 96  ELFGYSAGSHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQ 155
           ELFG+  G+  G ++ RAG   +A GGTL+LDEI +LPL  Q +LL  L+  E+ RVG+ 
Sbjct: 220 ELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSV 279

Query: 156 QPQPVDVRLVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAG 215
           Q Q VDVRL+AAT  DL  + +AG+F E LY  L   AL+LP LRER  D+  +A  F  
Sbjct: 280 QSQKVDVRLIAATHRDLKNLAKAGQFREDLYYRLHVIALKLPALRERGSDVNEIANVFLA 339

Query: 216 IYSVRLQRPVPLVSEAAQRVLEGHFWPGNTRELENVIHFALLVNDGEEILPE----DLDL 271
             S R+ R     S  A++ +  + WPGN RELEN +  A+++++  EI  E    D++L
Sbjct: 340 RQSARIGRDDLHFSAEAEQAIRHYSWPGNVRELENAVERAVILSESAEISAELLGIDIEL 399

Query: 272 PD 273
            D
Sbjct: 400 SD 401