Pairwise Alignments

Query, 276 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 441 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  199 bits (505), Expect = 1e-55
 Identities = 108/236 (45%), Positives = 144/236 (61%), Gaps = 1/236 (0%)

Query: 37  QQLREDLERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGL-FVSVNCAAISPTYADA 95
           ++LR+ L +LAP   PVLIRGE+GTGKEL+AR +HR S R    F+++NC AI      +
Sbjct: 146 RELRKLLGKLAPTESPVLIRGESGTGKELVARTLHRQSQRSEQPFIAINCGAIPEHLIQS 205

Query: 96  ELFGYSAGSHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQ 155
           ELFG+  G+  G    + G   +A GGTL+LDEI DLPL +Q  LL  L+ + + RVG  
Sbjct: 206 ELFGHEKGAFTGAHQRKTGRIEAADGGTLFLDEIGDLPLELQANLLRFLQEKHIERVGGS 265

Query: 156 QPQPVDVRLVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAG 215
           QP PVDVR++AAT +DL R +  GRF E LY  L    +   PLR+R GD+  LA +FA 
Sbjct: 266 QPIPVDVRVLAATHVDLERAIEQGRFREDLYYRLNVLQVVTAPLRDRHGDLSMLANHFAH 325

Query: 216 IYSVRLQRPVPLVSEAAQRVLEGHFWPGNTRELENVIHFALLVNDGEEILPEDLDL 271
            YSV   R     S+ A   +  H WPGN REL N +   L++ +G +I  +DL L
Sbjct: 326 FYSVETGRRPRSFSDHALAAMGRHDWPGNVRELANRVRRGLVLAEGRQIEAQDLGL 381