Pairwise Alignments

Query, 162 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 43.9 bits (102), Expect = 2e-09
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)

Query: 3   STIGVLLAVLISPLAQAELIDEIADRGE-LRIAVQAENSPYAFKQDDHLTGFDIEFGQAL 61
           +T   L+A  +S  A   L      +GE LR+A  A   P  F ++   TGFD+E  +A+
Sbjct: 2   NTRRTLVAAALSGFAFFGLAGMAQAQGEPLRVATDATFPPMEFVENGKRTGFDVELVEAI 61

Query: 62  AKELDLRAEFVEAPATEVLAGVESGKYDIAFTPSSESLTGDGPLDVSLPIGEKKLVIPFQ 121
            K L  + E+++     ++ G+ S ++D+A +    +      +D ++P     LV+  +
Sbjct: 62  GKTLGRKIEWIDIDFKGLVPGLISKRFDMAVSGIYITDERKKVVDFTVPYYAGGLVVMVK 121

Query: 122 KDNPAFES 129
             N A ++
Sbjct: 122 DGNTAIKT 129



 Score = 33.1 bits (74), Expect = 3e-06
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 121 QKDNPAFESAVNNALQRLKDSGRTAELEQKWF 152
           +KD P    AVN A+++LK  G   ++ +KWF
Sbjct: 214 RKDTPELTKAVNGAIEKLKADGTYDQIVKKWF 245