Pairwise Alignments

Query, 260 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 273 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  143 bits (360), Expect = 4e-39
 Identities = 87/250 (34%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 10  GACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVREH 69
           G  AG+LAGLFG+GGG ++VPV    F L     +V  HL++GTSLA IV TS+ +   H
Sbjct: 18  GVVAGLLAGLFGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSVRSFLTH 77

Query: 70  HRKRAVQWPIFIWMTIGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMALDLKP-K 128
            +K AV   +     + + LG  + +  A+      L+ I    AL +A +M ++    +
Sbjct: 78  RQKGAVDIDLLKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALAFRMIVNRASWQ 137

Query: 129 ASRGVPGKPGLIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIAV 188
               +P  P     G  IG  S + G+GGG +   F+T     + QAVATSS  G+ I++
Sbjct: 138 LGSDLPKNPARFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISL 197

Query: 189 ASALSFMLLGWHEEHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFA 248
              L ++  GW    LPP S G++   A+V +   ++  A +G RLAH LS + L+R F 
Sbjct: 198 PGLLGYIWAGWGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFG 257

Query: 249 ALLFCVGLSF 258
             L  V   F
Sbjct: 258 VFLVFVAAQF 267



 Score = 32.0 bits (71), Expect = 1e-05
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 8/124 (6%)

Query: 139 LIGAGGVIGWASAIFGIGGGSLTVP--FLTWRSLPMQQAVATSSACGLPIAVASALSFML 196
           L  AG V G  + +FGIGGG++ VP  +  +  L + +AV    + G  +A+    S   
Sbjct: 14  LAAAGVVAGLLAGLFGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSVRS 73

Query: 197 LGWHEEHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAALLFCVGL 256
              H +       G V +  L G  V         + +A   S   L+ +FA +   +  
Sbjct: 74  FLTHRQK------GAVDIDLLKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALAF 127

Query: 257 SFLI 260
             ++
Sbjct: 128 RMIV 131