Pairwise Alignments

Query, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 288 a.a., ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 19/209 (9%)

Query: 70  ELFTSASFHWLLGNSLSVAFTVAAIVVPLAYLFAFALQRTLIPAKGLWRGISLLPLLA-- 127
           +L+   SF     +SL VA +  AI   LA   A+AL        G  RG SL   +   
Sbjct: 78  DLWLDTSFRKAFVSSLVVAMSACAINTVLALPLAYALYH------GARRGGSLAARIVSA 131

Query: 128 -PSMLPAIALVYLFGNQGLLRGLLSDNIYGFWGIVLGEAIYTFPHALMILLSALSLAD-A 185
            P  +PAI L   FG   +    L+  +     ++   AI T P+    LL+ L   D  
Sbjct: 132 TPVAVPAITLA--FGYMIVFNTDLAPWLGSMPLLIAAHAILTLPYLTNTLLADLRHLDLG 189

Query: 186 RLFDAASSMGAGSWRAFTSITWPASRQAVFAAFCLVFTLTITDFGVPVVV----GGDYQV 241
           RL  AA+++GA  W+ FT I  P+ RQ++ +   +V  +++ +FGV  ++       Y V
Sbjct: 190 RLEQAAATLGASGWQQFTGIVLPSLRQSLISGLVMVAAISVGEFGVSNLLTSFQNRTYPV 249

Query: 242 LALEAYKAVVGQQQFGRGALIGMVLLLPA 270
           + L+A+    G   F   A + +++L  A
Sbjct: 250 VLLQAFYGATG---FACAATVILLVLASA 275



 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 19/207 (9%)

Query: 357 AYRNSVTMAIGTALIGSIVIFTGAYLMEKTQGQRLLNHALRLLSFIPMAVPGLVLGLGYV 416
           A+ +S+ +A+    I +++    AY +     +R  + A R++S  P+AVP + L  GY+
Sbjct: 88  AFVSSLVVAMSACAINTVLALPLAYALYHG-ARRGGSLAARIVSATPVAVPAITLAFGYM 146

Query: 417 FFFNLNGNPLHVLYGGMGLLVVCTIAHYLTTAQMTATTALRQLD-GEFEAAALSLKAPLY 475
             FN +  P     G M LL+       L     T    LR LD G  E AA +L A  +
Sbjct: 147 IVFNTDLAP---WLGSMPLLIAAHAILTLPYLTNTLLADLRHLDLGRLEQAAATLGASGW 203

Query: 476 KHFLRVTVPICLPALLDIIRYLFVSAMTTVSA-AIFLYSPDTLLAAI-----AVLNMDDA 529
           + F  + +P         +R   +S +  V+A ++  +    LL +       V+ +   
Sbjct: 204 QQFTGIVLP--------SLRQSLISGLVMVAAISVGEFGVSNLLTSFQNRTYPVVLLQAF 255

Query: 530 GNVGGAAAMSTLILLTSAGASLLLAAA 556
               G A  +T+ILL  A AS LL+++
Sbjct: 256 YGATGFACAATVILLVLASASALLSSS 282