Pairwise Alignments

Query, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 36/248 (14%)

Query: 64  GLLAARELFTSASFHWLLGNSLSVAFTVAAIVVPLAYLFAFALQRTLIPAKGLWRGISLL 123
           GLL   EL+ SA        SL +AF    + + + +  A+A+      AK   + + LL
Sbjct: 76  GLLTEDELYLSAYL-----GSLKMAFFSTLLCLLIGFPMAYAIAN----AKKETQTVLLL 126

Query: 124 PLLAPSMLPAIALVY----LFGNQGLLRG-------------LLSDNIYGFWGIVLGEAI 166
            ++ P+    +  VY    +  N GLL G             +L+ N+  + G+V     
Sbjct: 127 LIMMPTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVV----- 181

Query: 167 YTF-PHALMILLSALSLADARLFDAASSMGAGSWRAFTSITWPASRQAVFAAFCLVFTLT 225
           Y++ P  ++ L + L   D  L +AAS +G+ ++ +F  IT P S+  + A   LVF   
Sbjct: 182 YSYLPFMILPLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPV 241

Query: 226 ITDFGVPVVVGG-DYQVLALEAYKAVVGQQQFGRGALIGMVLLLPALFSFTVDAWLRRRQ 284
           + +F +P ++GG +  ++    ++     + +   + + +V+L   +    +     R Q
Sbjct: 242 VGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILL---FNRSQ 298

Query: 285 GEAMGGRA 292
            + M GRA
Sbjct: 299 AKEMEGRA 306



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 16/175 (9%)

Query: 357 AYRNSVTMAIGTALIGSIVIFTGAYLMEKTQGQRLLNHALRLLSFIPMAVPGLV-----L 411
           AY  S+ MA  + L+  ++ F  AY +   + +      L LL  +P     L+     +
Sbjct: 87  AYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKET--QTVLLLLIMMPTWTAILIRVYAWM 144

Query: 412 GL--------GYVFFFNLNGNPLHVLYGGMGLLVVCTIAHYLTTAQMTATTALRQLDGEF 463
           G+        G++ +  L   PL +L   + + +   +  YL    +     L + D   
Sbjct: 145 GILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIG-VVYSYLPFMILPLFANLVKHDPSL 203

Query: 464 EAAALSLKAPLYKHFLRVTVPICLPALLDIIRYLFVSAMTTVSAAIFLYSPDTLL 518
             AA  L +  +  F ++TVP+    ++     +F+  +        L  P+TL+
Sbjct: 204 LEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLM 258