Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 348 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 39/301 (12%)

Query: 57  RDSTGIITAKLLAEKERPQADAVWGLAAS-SLAILDQNGMLEAYAPKDLGKISGNYRDAA 115
           R    ++ + +LA ++  +  A  G      +A+LD+   LEA    D G I+  Y  A 
Sbjct: 57  RTGASVVQSPMLATEQIAKLTAAKGNQPPFDVAMLDEGPALEAI---DAGLIA-KYDPAK 112

Query: 116 NP------PAWVG-----MDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPN 164
           +P      P + G     + + A  I +N     K   + P SW DL KPEYKG++ + +
Sbjct: 113 SPNFAALNPKFQGAYGPAITMQAIGIAYNP----KTVKTPPTSWDDLWKPEYKGRVGITS 168

Query: 165 PASS-GTGFL----DVSAWLQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPI 219
            AS+ G  FL     ++   +   EP G+  +  L  N+     +      L   GE  I
Sbjct: 169 LASTLGLAFLLDINRLAGGTEANMEP-GFKKLKTLLPNLAAVSANFGAHGALFQQGEIDI 227

Query: 220 GISFEYPAVQLKRQGAPLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASP-AAM 278
           G+     A +LK +G P++ V    G         ++ G+ K ++A    D   SP    
Sbjct: 228 GVQNFNFAEELKAKGVPIEFVRVDTGTPAWKTTMHIVAGALKPELAYAYVDSQISPDVQS 287

Query: 279 ELYKENFAVLAAPG-------IAKPQTELPADYEQRLIKNDFVWASKNRDQILAEWRKRY 331
           E+ K  + V+           +A+   + PAD ++ +    F WA  N+++  A W +++
Sbjct: 288 EMQKSPWNVIPTSSKVPYAGLVAEKIAKTPADLDKMVF---FDWAKVNQNR--AAWTQQF 342

Query: 332 D 332
           +
Sbjct: 343 N 343