Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 334 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 27/305 (8%)

Query: 8   AVAVSAVFSLQASAADTQLTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTGIITAKL 67
           AV +    SL A AADT +      +     T  QA   A+  +++     ++G   A+L
Sbjct: 10  AVLLCGAASL-AQAADTAICYNCPPDWADWGTQLQAIA-ASTGVQVPLDNKNSGQSLAQL 67

Query: 68  LAEKERPQADAVW-----GLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVG 122
           +AEK  P AD V+     GL A    ++D       Y PK   +I    +D A    W  
Sbjct: 68  VAEKAAPVADVVYYGVTFGLQAQKAEVVD------TYKPKAWDQIPAGLKDPAGH--WFA 119

Query: 123 MDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTF 182
           +      I  N ++A   GL  P SW DL KPEYKG +   +P+S+  G++   A  +  
Sbjct: 120 IHSGTLGIMVN-VDA-LGGLPVPHSWADLLKPEYKGMVGYLDPSSAFVGYVSAVAINRAM 177

Query: 183 -GEPQGWAYMDALHQNIGQYVHSGSKPCKLA--AAGEFPIGISFEYPAVQLK-RQGAPLD 238
            G+   +A      Q + +      K    A   +GE PI + +++ A + + +  A + 
Sbjct: 178 GGDLDNFAPAIDYFQKLAKNTPIVPKQTAYARVLSGELPILVDYDFNAYRARYKDKANVA 237

Query: 239 IVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPGIAKPQT 298
            V+P+EG        +++  +P    A+++ DF  S     L+ + +     P       
Sbjct: 238 FVIPEEGSISVPYVMSLVANAPHRANAQKVLDFVLSDEGQALWAKAYLRPVRP------M 291

Query: 299 ELPAD 303
           ++PAD
Sbjct: 292 KMPAD 296