Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 30/355 (8%)

Query: 1   MHKHLALAVAVSAVFSLQASAADTQLTVYTALEAEQLKTYK--QAFEKANPDIEIKWVRD 58
           M+  +AL+    A+ +  A AA T          E++   K   AFEKAN ++ +  V  
Sbjct: 1   MNPRIALSCLSLALLASTAHAAPTLYLGMNGGTMERVYADKVLPAFEKAN-NVNVVIVPG 59

Query: 59  STGIITAKLLAEKERPQADAVW---GLAASSLAILDQNGMLEAYAPKD-LGKISGNYRDA 114
           ++  I AK+ A K+ PQ   ++   G+   ++A+    G+ +  AP   L +I    +  
Sbjct: 60  TSSDILAKVQANKDNPQMHVMFLDDGIMYRAIAM----GLCDKLAPSPTLEQIPAKAKIK 115

Query: 115 ANPPAWVGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTG--- 171
                 V + +    + +N    +++G + P SW DL  P +K K+V  + ASS  G   
Sbjct: 116 EEA---VAVTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKDKVVFQSLASSTFGLHG 172

Query: 172 ---FLDVSAWLQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAV 228
              F  +    +T  +P   A+   +  N+ +Y+ S +K  ++    E  I         
Sbjct: 173 FLMFNRIQGGDETNVDPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVA 232

Query: 229 QLKRQGAPLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADF----SASPAAMELYKEN 284
             K  G P++   PKEG      A  VI  + + ++A++LA F     A   A+E   + 
Sbjct: 233 TQKLLGVPMEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAFLLTAEAQAPALEEGDQI 292

Query: 285 FAVLAAPGIAKPQTELPA--DYEQRLIKNDFVWASKNRDQILAEWRKRYDGKSEK 337
            +    P   K +  + A   Y Q  I  D  W   N  Q   EW  R+    E+
Sbjct: 293 PSNPTTPTTDKTRARVEAMQGYLQTAISID--WDQVN--QARPEWNARWSRSIER 343