Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 349 a.a., ABC transporter spermidine/putrescine-binding protein from Variovorax sp. SCN45

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 9/252 (3%)

Query: 18  QASAADTQLTVYTA-LEAEQLKTYKQAFEKANPDIEIKWVRDSTGIITAKLLAEKERPQA 76
           +A+  + +LT Y   L +E  +T  +AF    P +++  VR +  +   +L  + +   A
Sbjct: 36  EAAKKERELTWYIVFLPSEDAETMARAFTARYPGVKVNVVRTTAQVAFQRLNQDLKARTA 95

Query: 77  --DAVWGLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVGMDVWAATICFNT 134
             D            L    +L  Y P     +    ++      +     +   + +N+
Sbjct: 96  NCDVFSSTDIGHYVDLKARKLLTKYTPASAALMDSRLQNLDADGYYHAASAFMVGLVYNS 155

Query: 135 IEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGWAYMDAL 194
            + +      P SW DL  P+++G   + +P  SG     V  W     +  G  +   L
Sbjct: 156 NKVK--AAEAPTSWMDLADPKWRGLASVGHPGFSGA----VGTWCIEMRKLYGDGWFKKL 209

Query: 195 HQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLPKEGLGWEIEATA 254
             N  Q   S         +GE  I       A     +G PL +  PKEG    +  +A
Sbjct: 210 ALNKPQVGRSIIDTVTTVNSGERSISAGPVNLAALTASKGNPLAVSAPKEGPVLIVSPSA 269

Query: 255 VIKGSPKADVAK 266
           ++  +P  + +K
Sbjct: 270 IMANAPHPNASK 281