Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 18/168 (10%)

Query: 125 VWAATICFNTIEAEKQGLSKPVSWQDLTKPE-YKGKIVMPNPA---------SSGTGFLD 174
           VW+  I ++  +  +     P SW D    + Y GK  +   A         + G    D
Sbjct: 127 VWSVAIAYDRSKLAQA----PASWADFWDVDKYPGKRGLRKRAVYNLEFALLADGVKVED 182

Query: 175 VSAWLQT-FGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQ 233
           V   L T  G  + +A +  L  +I Q+  +G++P +  AAG+  +  ++        +Q
Sbjct: 183 VYRVLSTPAGVERAFAKLSELKPHI-QWWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQQ 241

Query: 234 GAPLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELY 281
           G+PL +V P  G  + ++  A+IKGS   D AKRL  ++  P     Y
Sbjct: 242 GSPLAVVWP--GSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRY 287